PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g985800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 118aa    MW: 13709.8 Da    PI: 8.4877
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g985800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.82.6e-1016971390
                      TT-EE--HHH.HTT..---..--SEEEEEETTS..-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3 13 sgrlvlpkkfaeeh..ggkkeesktltledesg..rsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90
                      +grl +p + + ++  +  +++ +++++e ++g    W++ +++rkk+ r  ++ ++GW +Fv+a+gL++gD vv+  + ++ +
  Pd.00g985800.m01 16 EGRLAVPAEWL-KIlpQ-FEKGCFEVQFEVTDGvgFFWQLCCSIRKKGYRkpVLQSEGWLKFVNAKGLQVGDKVVLDTKADDFR 97
                      46788888888.45553.334557888777777558899999886666666566679*******************97654333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MAHFEFEKYL TETDIEGRLA VPAEWLKILP QFEKGCFEVQ FEVTDGVGFF WQLCCSIRKK  60
GYRKPVLQSE GWLKFVNAKG LQVGDKVVLD TKADDFRGTK IRIRAQKDLN RNGHWVDV