PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g988320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 199aa    MW: 22103 Da    PI: 6.1549
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g988320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-191665255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  Pd.00g988320.m01 16 RYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEEPEMAAAAYDAAALHLRG 65
                      69****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEPPAADCHH LPSSARYRGV RKRKWGKWVS EIREPGKKTR IWLGSYEEPE MAAAAYDAAA  60
LHLRGRGAVL NFPELVDSLP RPASSSPMDV QLAAQEAALR VRRLRMGAVS TEAAGGSSSP  120
RGFSSMPVTV GLSPSQIQAI NESPLDSPKL WMQYMYRAHC HEGLSLLGDD MSCVEYHDEE  180
VELGECENMQ HFSIWDSYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.11e-50ERF family protein