PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g989540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 221aa    MW: 25127.9 Da    PI: 4.8944
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g989540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.61.4e-221659851
                      HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                       rqvtfskRr gi KKA ELSvLC+ evav+ifs tgkl++yss
  Pd.00g989540.m01 16 ARQVTFSKRRRGISKKAAELSVLCESEVAVVIFSATGKLFDYSS 59
                      69****************************************96 PP
2K-box35.25.2e-13861651494
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                        +  +++  kL ke+e+  r++R+++GedL++L+l eL +Le+ +e  l ++ ++K+el+++ i  l kk  el e+n+++
  Pd.00g989540.m01  86 LQLENENRIKLSKELEKN-RQLRQMKGEDLQELDLDELLKLEHLVEATLVRVMETKEELIMSDIVALEKKGTELVEANNQM 165
                       233333334555555553.677********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MMRENIKIKK IDYLPARQVT FSKRRRGISK KAAELSVLCE SEVAVVIFSA TGKLFDYSSS  60
SIKDVIEWYK MRTNGVEKSD EESLELQLEN ENRIKLSKEL EKNRQLRQMK GEDLQELDLD  120
ELLKLEHLVE ATLVRVMETK EELIMSDIVA LEKKGTELVE ANNQMVMLRE RMVMLSKRNT  180
GPALVEPSES ATSTSCNSAL SLSLEDDCSD DVILSLKPGR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24540.11e-39MIKC_MADS family protein