PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g991260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 94aa    MW: 10709 Da    PI: 8.5173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g991260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.83.9e-0822611554
                      HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      +i +  ++L++llP+ + + +s K+s + +L+++++YIk+L
  Pd.00g991260.m01 22 QITDLVSKLQQLLPEiR-NRRSDKVSASKVLQETCNYIKNL 61
                      7889999********77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MSSRRSSRSR QSGTSRNISD EQITDLVSKL QQLLPEIRNR RSDKVSASKV LQETCNYIKN  60
LHREVDDLSD RLSELLASTD MDSDQAAIIR SLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.16e-40bHLH family protein