PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g991780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 230aa    MW: 25306.8 Da    PI: 9.6646
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g991780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.81.6e-221196188
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88
                      kfYn+YA+ vGFs+r+sk +k+ + g+  +r fvCs egkre++k +  + +++raetr gC a++k++ + ++k++vt+++ eH+H 
  Pd.00g991780.m01 11 KFYNAYAYGVGFSIRRSKFHKE-KCGKLRDRLFVCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 96
                      6*****************9998.6677******************99.9999***********************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEFETEEEAF KFYNAYAYGV GFSIRRSKFH KEKCGKLRDR LFVCSAEGKR EKNKCDGSVK  60
SHRAETRFGC LARMKISCRL NDKYCVTEFV PEHTHVTSSP CKTHFFRSHR NMSLANAYIS  120
LQHFVKHIVH STSSDPMTLI GVGVGALPCS CWSRSFSSGI AAAVFKSISF SSPSQGLINS  180
NSNSTGTIAW LVTTETDDGG GGGYGRRDRV TKLVLLTASK LVGMGSCGRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-17FAR1 family protein