PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g992200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 565aa    MW: 64571.2 Da    PI: 9.6866
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g992200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.72.4e-19221031199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + s+rl++p kf+e+++g+  + ++  l+ +s + W+vkl  + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f  +vk++++
  Pd.00g992200.m01  22 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 103
                       4.467********999888..4568***************..********************************998999..9999987 PP
2B337.93.2e-121992691588
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                       r+++p++ a + g+  +    ++l+d++grsW v+l+   +++r  ++ GW e  kan++  gD+++F+l++++
  Pd.00g992200.m01 199 RVTIPNELAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLDMAIGWTECRKANQISPGDSIIFELVKQE 269
                       789******999988544..7***************5.4555669999*********************98754 PP
3B352.49.6e-17286373197
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffkvl     + ++ l+lp  f+e+ +g++  + +  l+ ++g+ W+v+l  + + +++++ +GW++Fv+++ L+ g f+vF +dg+s+f   
  Pd.00g992200.m01 286 FFKVL--LGDFYQN-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWQGFVRDHCLEIGNFLVFDYDGDSKF--D 369
                       56666..5555565.9**********8873.44.89**************..**********************************9999..6 PP

                       EEEE CS
                B3  94 vkvf 97 
                       v+++
  Pd.00g992200.m01 370 VTIY 373
                       6655 PP
4B351.32.1e-164665431696
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++pk+ a + g++  ++kt++l+d+ grsW vkl++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s   + +++
  Pd.00g992200.m01 466 VTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVKLRVHRSPyQRFDMTKGWAKCCRANQISQGDTIVFEFVKPSV--MQIHI 543
                       68******999999..6779***************985555156*************************876433..35555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    
MARPRKRSPK KPSFFKILIG DFSQRLRIPP KFIENFNGQS LRKCALRGPS RQWWDVKLEE  60
RENSLFFRDG WQGFVKDHVL EVGDLLVFSY NGKSKFKVKI YDRSACEKNV EVAERRSGSP  120
VPLVNKGNQA QVKDEIVELD TEDCENKTID SDRRSCKYPI SEKRPVSFCV QETSTGSILF  180
KSENPCFLVC SRKQHLLYRV TIPNELAVAE GLRRRDAVML QDPTGRSWLV ELRVESRNRL  240
DMAIGWTECR KANQISPGDS IIFELVKQEA QMARKLSKPS LKKQSFFKVL LGDFYQNLRL  300
PPVFIEKLDG QSLPKCALRG PNGKLWTVEL EERENGFFFH DGWQGFVRDH CLEIGNFLVF  360
DYDGDSKFDV TIYEPTGCEK DVEAAKRRNG NPVSSVKDEI VDIETENYNK ESKSKTINAE  420
RTSRKYVMSG KRPANDCVEE TSTGSILFKS ENSCFIKILT KTLYPVTIPK ELAIAEGLVR  480
KKTVKLQDPA GRSWIVKLRV HRSPYQRFDM TKGWAKCCRA NQISQGDTIV FEFVKPSVMQ  540
IHIYRGGRVG GSGCSVVLVN PGLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-26B3 family protein