PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g992210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 676aa    MW: 74645.8 Da    PI: 8.345
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g992210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.92.2e-194365131699
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       l++p kf+++++   + + +  l  +sg +W+v+l  + + ++ ++++GW++Fvk+++L+ gDf+vFk+dg+s+f  +v+++++
  Pd.00g992210.m01 436 LRIPPKFVKNFNVR-PLH-KCALSGPSGIRWTVEL--EERENGLFFQDGWQGFVKDHHLENGDFLVFKYDGESKF--KVTIYDR 513
                       89******666544.454.899*************..**********************************9999..8888886 PP
2B3345.3e-115816611698
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        ++pk+ a + g+ +  +k ++++d++grsW vkl++  + +s+r+ +++G  + ++an++  gD+ +F++++ s +   +++fr
  Pd.00g992210.m01 581 HSIPKEVAVTEGLLS--KKSMMIQDPTGRSWPVKLRVrgKLSSCRVDMSTGLLDCCNANQIIPGDTAIFEFVKPSLA--QIHIFR 661
                       589999998888774..4569**************9966667778*************************9875544..666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
MLANTDLARI NEPTRVPLLE GHGDEGGANK LRWWMKVLDM EEAKKQVGLS GALETLCGQG  60
FGAKLYKMLG IYLQASCIIS FLFCFIISII WFYTEPILIL LHQDPQISKS VAVFMKFLIP  120
GLFAYGFLQN ILRFLQAQFV VLPLVFSFVP LVIHFGIAYG LVHSTALGYK GAPLAASISL  180
WLSALLLAMY VICSKKFEHT WEGFSLESFH YVLTDLKIAL PSALMVCLEE WAFEILVLMG  240
GLMPNSEETT SLMAMCVNTE ALAYMIIYGL SATASTRVSN ELGAGNPDKA KKAMAVTLKL  300
SMLLALVLVL TLAVGHNIWA GFFSDSHIIA EQFASMVPLL VISIIVDSVQ GVLSGVARGC  360
GWQHLTVYVN IVTFYLIGMT ISSLLGFKFK LHAKGLWIGL TCGLSCQAAT VLYITQSTKW  420
TVLDLSDIAE REKPVLRIPP KFVKNFNVRP LHKCALSGPS GIRWTVELEE RENGLFFQDG  480
WQGFVKDHHL ENGDFLVFKY DGESKFKVTI YDRTACEKNV KLAEGSGCPV SLANKKKAQV  540
KEEIVDCETR NYNKICQNKA IVCGRRSGNY VIPGRRPAND HSIPKEVAVT EGLLSKKSMM  600
IQDPTGRSWP VKLRVRGKLS SCRVDMSTGL LDCCNANQII PGDTAIFEFV KPSLAQIHIF  660
RVGGNSVVLA APDVKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.13e-15B3 family protein