PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g994030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 224aa    MW: 25126.4 Da    PI: 10.1986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g994030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-13151196655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  Pd.00g994030.m01 151 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 196
                       689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSSQQQGYSG LPPHYPRQSS FNGSYGLVGS AAMNHHTQPK AVHSNLVRQS SSPAGLFSNS  60
SVQNGFQFGT WNDSSNFAEN LGGMRRDQDN DGKLFSVPQN GELENRIHLL SHHLSLPKTS  120
AEIAMEKFLQ LQDSVPCKVR AKRGCATHPR SIAERVRRTR ISERMRKLQE LVPNMDKQTN  180
TADMLDLAVE YIKDLQKQFK TLSDVRANCK CLNMQKKPVS NQIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-93bHLH family protein