PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX57653.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 269aa MW: 30248.6 Da PI: 9.8382

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX57653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.2	5.8e-11	13	76	1	48
TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l d+++ +G g ++ +r g++R++k+c++rw +yl RDX57653.1 13 KGAWSKQEDQKLCDYIRAHGAGrwcslpkaaalktyiqIGHACMRLSGLHRCGKSCRLRWINYL 76 79******************99999999999988888888888888************97 PP
2	Myb_DNA-binding	49.7	8.3e-16	82	149	1	47
TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................tWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++++lG++ +W++Ia +++ gRt++++k++w+++ RDX57653.1 82 RGNFSQDEEDLIIKLHALLGNRrivrslsvldkgnefdfvgygvRWSLIAGRLP-GRTDNEVKNYWNSH 149 89**************************************************.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MRKPCCDKEG TNKGAWSKQE DQKLCDYIRA HGAGRWCSLP KAAALKTYIQ IGHACMRLSG 60 LHRCGKSCRL RWINYLRPNI KRGNFSQDEE DLIIKLHALL GNRRIVRSLS VLDKGNEFDF 120 VGYGVRWSLI AGRLPGRTDN EVKNYWNSHI RRKLIKMGID PNNHRLNQSF PVAKACNVSE 180 ATSAQSSGSM VTQHRVPFIK SCGSANDRIS DTHSCLVEET SHLNLDLTIA FPSPTHALVQ 240 HKCNKPTSQC TNTRNIHEDS APTGLLLFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	4e-64	MYB family protein