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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX57703.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | bHLH | ||||||||
| Protein Properties | Length: 257aa MW: 29731.1 Da PI: 8.0486 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 38.3 | 2.5e-12 | 81 | 132 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
rr++h e+Er+RR++i + ++ L++l+P++ + ++ + a+i A++++k+L+
RDX57703.1 81 RRMTHIEMERNRRRQITHHLAVLKSLMPSS---YVQRGDHASIIGGAIDFVKELE 132
8*****************************...9******************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 257 aa Download sequence |
MERESLRITI NMSFFHMVES LESPEFIPFK EPNLETLVES CVTHDLPQSN ELEDCRHRES 60 KTSTRKRRKR KTKNKEDAEK RRMTHIEMER NRRRQITHHL AVLKSLMPSS YVQRGDHASI 120 IGGAIDFVKE LEQLVQSMEA QKRVRNKEEV GSSELFEHDY EEVKCEGEVK AEKNSEAVAV 180 DVTVIQTHVN LKIQCLRRPG QLIKAIVALE DLRLTVLHLN ITSSDATVLY SFNLKSNLLS 240 GIKSLYFSDA VLLLHHR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 65 | 71 | RKRRKRK |
| 2 | 65 | 82 | RKRRKRKTKNKEDAEKRR |
| 3 | 66 | 83 | RKRRKRKTKNKEDAEKRR |
| 4 | 67 | 84 | RKRRKRKTKNKEDAEKRR |
| 5 | 68 | 85 | RKRRKRKTKNKEDAEKRR |
| 6 | 69 | 86 | RKRRKRKTKNKEDAEKRR |
| 7 | 82 | 93 | RMTHIEMERNRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G46810.1 | 2e-51 | bHLH family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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