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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX57843.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 202aa MW: 22160.7 Da PI: 8.2083 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 62.9 | 6.8e-20 | 22 | 72 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr ++ +gr++AeIrdp + ++r++lg+f++aeeAa+a++ a++ l+g
RDX57843.1 22 PRYRGVRKRP-WGRFAAEIRDPLK---KARVWLGTFDSAEEAARAYDDAARTLRG 72
68********.**********743...5*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 202 aa Download sequence |
MRRGRGGPPA AAAVNGSILK EPRYRGVRKR PWGRFAAEIR DPLKKARVWL GTFDSAEEAA 60 RAYDDAARTL RGPKAKTNFP LSPFCYQHPT TDPFFYAGFH NNLNNPQRPT SSGMSSTVES 120 FSGPRPPTTT PFLTAARRYP RTPPLVPEDC HSDCDSSSSV VDDGDDNIVS SSFRPPLPFD 180 LNALPFDDAA ADDDLRCTAL CL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G50640.1 | 9e-37 | ERF family protein | ||||




