PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX57877.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 471aa MW: 52282.7 Da PI: 6.6093

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX57877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	25.5	2.3e-08	65	92	1	27
--S---SGGGGTS.--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartG.tCkyGdrCkFaHgp 27 +kt+lC++f+ C++Gd C++aHg+ RDX57877.1 65 WKTSLCSYFRSHNgSCSHGDACRYAHGE 92 8****7776658**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MAEPLPNTEL SPSKTLNPTN GHDFTSEPHQ MAPQDAQHHP QNDDVVPTEK RKRDDDDDRS 60 LHPLWKTSLC SYFRSHNGSC SHGDACRYAH GEEELRLRPD NTWDPTSERA KKYLKSETGE 120 KHAVSEGVMM TEAVVDGGDD DGSGSNHALS KCLVHLPRKW CSENLRSFLN QEACMFGCFR 180 GIPFKHAKKK KGMMIGFVTF EDEEQMKSSS TGLEGKSIGN KKIKVADVIP RSFEKKSNAN 240 VASHQEFDEE NTGVDVPSSG TLNDETNNDK LAVDGSVSRA RNVRDAATPL AHMAYADQLE 300 QKKSSLMQIL KKLTRNARKA CPNGVSLPEW ILKSREIVFS PFPSHISAGG LPCKLEGVIA 360 SPIVNGYRNK CEFSVGYSLE GKVTVGFMLG NFREGVTAVE EAVDCPNVST IACKYATIFQ 420 EFLQHSDLPV WNRFKNTGFW RQLTVREGRT NENVVDAETF GGIAEVMLIV Q

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MAEPLPNTEL SPSKTLNPTN GHDFTSEPHQ MAPQDAQHHP QNDDVVPTEK RKRDDDDDRS  60
LHPLWKTSLC SYFRSHNGSC SHGDACRYAH GEEELRLRPD NTWDPTSERA KKYLKSETGE  120
KHAVSEGVMM TEAVVDGGDD DGSGSNHALS KCLVHLPRKW CSENLRSFLN QEACMFGCFR  180
GIPFKHAKKK KGMMIGFVTF EDEEQMKSSS TGLEGKSIGN KKIKVADVIP RSFEKKSNAN  240
VASHQEFDEE NTGVDVPSSG TLNDETNNDK LAVDGSVSRA RNVRDAATPL AHMAYADQLE  300
QKKSSLMQIL KKLTRNARKA CPNGVSLPEW ILKSREIVFS PFPSHISAGG LPCKLEGVIA  360
SPIVNGYRNK CEFSVGYSLE GKVTVGFMLG NFREGVTAVE EAVDCPNVST IACKYATIFQ  420
EFLQHSDLPV WNRFKNTGFW RQLTVREGRT NENVVDAETF GGIAEVMLIV Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	224	KKKKGMMIGFVTFEDEEQMKSSSTGLEGKSIGNKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28450.1	1e-132	C3H family protein