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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX57946.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 209aa MW: 23583.2 Da PI: 6.2798 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 61.5 | 1.8e-19 | 51 | 99 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g
RDX57946.1 51 YRGIRQRP-WGKWAAEIRDPTK---GVRVWLGTFNTAEEAARAYDREARKIRG 99
9*******.**********964...4************************998 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 209 aa Download sequence |
MCGGAIIAEF IPKHRSRSPK ASELWPNESH LQLPESSPQP PPAKRQRKNL YRGIRQRPWG 60 KWAAEIRDPT KGVRVWLGTF NTAEEAARAY DREARKIRGK KAKVNFPNED DHYSTQVPAD 120 PVPPLYQQQY GSKSLNLEFG YDLNQTGVFP SQGAINTDPV FGSSDENCGY ENYMGFYEIP 180 YFDAQSAPQN VVGDFWTFDA PEPEASPSL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G47520.1 | 1e-39 | ERF family protein | ||||




