PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58343.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 555aa MW: 62176.8 Da PI: 8.082

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.6	3.1e-42	260	336	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ k+yh+rhkvC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+q RDX58343.1 260 VCQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQ 336 6**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MLSQKLQKTP TCFWFGSRGR NHVDSRSICF NVTTTLNKPK KAHFSLFLSL SLFTLLCAKT 60 KTTHKGATPS VSICDFNSVV LMESWSYVPE EKGYLFSDEM DFSLDAFMRS RKALVEWDNK 120 SNFERDGFNS DREVVKSMEF VDLGFPDLLQ KSFHGNQPLE TSSYELDSNN SSKRGNSSTH 180 VIALDSSLGE EESDSKHLSS LVESKTQDSL LIDLKLGRIA DCKGASSDKV AKEEFTLTSI 240 HPTMLSKRAR TSSLSPQAPV CQVYGCNMDL SSSKDYHKRH KVCDVHSKTA KVIVNGIEQR 300 FCQQCSRFHL LAEFDDGKRS CRRRLAGHNE RRRKPQFDYM TGKQHKILQS YQGTKYLGSS 360 LQNKPQFPFQ DIFQSGILFP EKHAQISQNG RVKLEEDSIY SSQLAAPATL GQELSSCALS 420 LLSDQSQYQS RHAAGNPLAS PRNFHGIHMA DGDDGVSKTP LRISSADNYA PNESFPCNAA 480 SIKNRSAPFS NAGHALHGDG ICQPPELLEV KHRLSSEHGG TTVDLFQLSS HLQRVEQQRN 540 SVLVKWENEE YCFPT

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MLSQKLQKTP TCFWFGSRGR NHVDSRSICF NVTTTLNKPK KAHFSLFLSL SLFTLLCAKT  60
KTTHKGATPS VSICDFNSVV LMESWSYVPE EKGYLFSDEM DFSLDAFMRS RKALVEWDNK  120
SNFERDGFNS DREVVKSMEF VDLGFPDLLQ KSFHGNQPLE TSSYELDSNN SSKRGNSSTH  180
VIALDSSLGE EESDSKHLSS LVESKTQDSL LIDLKLGRIA DCKGASSDKV AKEEFTLTSI  240
HPTMLSKRAR TSSLSPQAPV CQVYGCNMDL SSSKDYHKRH KVCDVHSKTA KVIVNGIEQR  300
FCQQCSRFHL LAEFDDGKRS CRRRLAGHNE RRRKPQFDYM TGKQHKILQS YQGTKYLGSS  360
LQNKPQFPFQ DIFQSGILFP EKHAQISQNG RVKLEEDSIY SSQLAAPATL GQELSSCALS  420
LLSDQSQYQS RHAAGNPLAS PRNFHGIHMA DGDDGVSKTP LRISSADNYA PNESFPCNAA  480
SIKNRSAPFS NAGHALHGDG ICQPPELLEV KHRLSSEHGG TTVDLFQLSS HLQRVEQQRN  540
SVLVKWENEE YCFPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	9e-60	SBP family protein