PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58570.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

RAV

Protein Properties

Length: 360aa MW: 39430.3 Da PI: 9.0155

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.8	6.2e-14	61	109	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ ++r++lg+f ++eAa+a++ a+++++g RDX58570.1 61 SKYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEDEAARAYDIAAQRFRG 109 89**9888.8*****3.....5******99***********98 PP
2	B3	89.4	2.7e-28	183	278	1	83
EEEE-..-HHHHTT-EE--HHH.HTT.............---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.............ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+ tpsdv+k++rlv+pk+ ae+h +++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++L++gD v F RDX58570.1 183 FEKTVTPSDVGKLNRLVIPKQQAEKHfplgggsgdgvspC---VaaaKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVRFF 278 99*************************98887655551...0555999********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDRGGSTDET TTTSDSLSVP ARLSPPPTNT LSRVGSGASA VVDPDGCGGS GEAESRKLPS 60 SKYKGVVPQP NGRWGAQIYE KHQRVWLGTF NEEDEAARAY DIAAQRFRGR DAVTNFRPLT 120 CASDDDAEFE FLNSHSKFEI VDMLRKHTYD DELQQSRRGT CDGRRRRHGE TASSGAKARE 180 QLFEKTVTPS DVGKLNRLVI PKQQAEKHFP LGGGSGDGVS PCVAAAKGVL LNFEDVGGKV 240 WRFRYSYWNS SQSYVLTKGW SRFVKEKNLR AGDAVRFFKS TGPDRQLFID CKARNSGEVD 300 TNGGLFIPVV EPVQIVRLFG VNLLKLPGSD GVGVGCDGKR KEMELFALEC SKKLKVIGAL

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDRGGSTDET TTTSDSLSVP ARLSPPPTNT LSRVGSGASA VVDPDGCGGS GEAESRKLPS  60
SKYKGVVPQP NGRWGAQIYE KHQRVWLGTF NEEDEAARAY DIAAQRFRGR DAVTNFRPLT  120
CASDDDAEFE FLNSHSKFEI VDMLRKHTYD DELQQSRRGT CDGRRRRHGE TASSGAKARE  180
QLFEKTVTPS DVGKLNRLVI PKQQAEKHFP LGGGSGDGVS PCVAAAKGVL LNFEDVGGKV  240
WRFRYSYWNS SQSYVLTKGW SRFVKEKNLR AGDAVRFFKS TGPDRQLFID CKARNSGEVD  300
TNGGLFIPVV EPVQIVRLFG VNLLKLPGSD GVGVGCDGKR KEMELFALEC SKKLKVIGAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	355	KRKEMELFALECSKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25560.1	1e-133	RAV family protein