PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58600.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

FAR1

Protein Properties

Length: 758aa MW: 86675.5 Da PI: 6.3995

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.1	2e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel RDX58600.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQIKPSDDAKVQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFRNIHNHELL 152 6*************9998874556679***************99**************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
MSEGTSLVLE SSENGTDLSQ DDIGTIEETP EETILSRQTS VNLVPFIGQR FVSQEAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QIKPSDDAKV QRNRKSSRCG 120 CQAYMRIVKR ADFDVPEWRV TGFRNIHNHE LLKSNEVRLL PAYCPISPDD KSRICMFAKA 180 GMSVRQMLRL MELEKGIKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLIA MCKRLKDENH 240 DFKYEFKIDN NNRLEHIAWS YSSSIQSYEA FGDAVVFDTT YRVDAYDMLL GIWLGVDNNG 300 MTCFFSCALL RDENMQQEPY DIAFLSFMKG KAPQTILTDH NMWLKEAIAV ELPETKHAFC 360 IWHILSKFSD WFSLLLGSQY DEWKAEFHRL YNLELVDDFE EGWRQMVDKY GLHTNKHIIS 420 LYSLRTFWAL PFLRCSFFAG LTSTCQSESI NAFIQRFLSA QSQLDHFVEQ VADIVDFNDR 480 AGAKQKMQRK MQKVCLKTGS PIESHAATIL TPYALSKLQE ELVLAPQYAS FMVGEDCFQV 540 RYHSQSDGGC KVFWVPCQEH ISCSCQLFEF SGILCRHVLR VMSTNNCFHI PDQYLPARWR 600 GISSSSVNHF RGTNCRDQPE RIQFLESMAS SFLVESIETE ERLDVACEQI SMVLSRIKTL 660 PRSTHGVNDI AYSYPSDSLI LPEVEDTDGM IHGFAITNPH DSITTGKLKE RRARDGVDLT 720 RKRRQFSGPL CAQYGHDASD CSIMAGDNMS GDALGCML

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

MSEGTSLVLE SSENGTDLSQ DDIGTIEETP EETILSRQTS VNLVPFIGQR FVSQEAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QIKPSDDAKV QRNRKSSRCG  120
CQAYMRIVKR ADFDVPEWRV TGFRNIHNHE LLKSNEVRLL PAYCPISPDD KSRICMFAKA  180
GMSVRQMLRL MELEKGIKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLIA MCKRLKDENH  240
DFKYEFKIDN NNRLEHIAWS YSSSIQSYEA FGDAVVFDTT YRVDAYDMLL GIWLGVDNNG  300
MTCFFSCALL RDENMQQEPY DIAFLSFMKG KAPQTILTDH NMWLKEAIAV ELPETKHAFC  360
IWHILSKFSD WFSLLLGSQY DEWKAEFHRL YNLELVDDFE EGWRQMVDKY GLHTNKHIIS  420
LYSLRTFWAL PFLRCSFFAG LTSTCQSESI NAFIQRFLSA QSQLDHFVEQ VADIVDFNDR  480
AGAKQKMQRK MQKVCLKTGS PIESHAATIL TPYALSKLQE ELVLAPQYAS FMVGEDCFQV  540
RYHSQSDGGC KVFWVPCQEH ISCSCQLFEF SGILCRHVLR VMSTNNCFHI PDQYLPARWR  600
GISSSSVNHF RGTNCRDQPE RIQFLESMAS SFLVESIETE ERLDVACEQI SMVLSRIKTL  660
PRSTHGVNDI AYSYPSDSLI LPEVEDTDGM IHGFAITNPH DSITTGKLKE RRARDGVDLT  720
RKRRQFSGPL CAQYGHDASD CSIMAGDNMS GDALGCML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	720	725	TRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein