PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX58612.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 316aa    MW: 35743.3 Da    PI: 6.1673
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX58612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.58.5e-152471148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ede+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
       RDX58612.1 24 KGLWSPDEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 71
                     678*******************************************97 PP
2Myb_DNA-binding50.93.7e-1677121147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E++l+++++  lG++ W+ Ia++++ gRt++++k++w++ 
       RDX58612.1  77 RGAFSPQEEDLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 121
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MRKPDLMANN NKDKMNSIRS KLRKGLWSPD EDEKLMRYML TNGQGCWSDI ARNAGLQRCG  60
KSCRLRWINY LRPDLKRGAF SPQEEDLIIH LHSILGNRWS QIAARLPGRT DNEIKNFWNS  120
TLKKRLKTNT STPSQNNSTD SSESKDVLSG MMPFNEHDMM TMCMDSSSSI SSMQAMVLPD  180
QFDPFSMLVN NQCDMTNVSA DFPNMPASCL TQLGMVEGHQ GNYGILEPNK MGLGRDFSLP  240
SLESTSIESN SVQIDVKSHN NHFNYGSFNN TDKIQGSKVE DLIGFGNHGQ GENLKMGEWD  300
LENLMQDITS FPFLDF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122128LKKRLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.19e-74MYB family protein