PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX59177.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 385aa MW: 42493.1 Da PI: 8.4932

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX59177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.7	2.5e-35	22	124	2	98
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssasnsssg.. 88 +g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + a++++++a+ ss + RDX59177.1 22 TGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELppwhptpntaN--------ADHNNNNAAGSS-Dma 111 79**************************************************************66544332221........222222222122.123 PP TCP 89 ..kaaksaa.ksk 98 ++++s+ + + RDX59177.1 112 iaEQSESSGyNFQ 124 3322222221222 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MGMKSTGGEI VQVQGGHIVR STGRKDRHSK VFTAKGPRDR RVRLSAHTAI QFYDVQDRLG 60 YDRPSKAVDW LIKKAKNAID KLAELPPWHP TPNTANADHN NNNAAGSSDM AIAEQSESSG 120 YNFQLQRQLG EDHDNHHSAF IPSPIDTDAI AFFPTTTATS SINFQTYPPD IISRTNNSTE 180 DLGLSLHSFQ DPGLIHAQSQ AGANQTPSND QTLFSGSTQG GFEANYPRIV SWNNDASTDM 240 NRTGFMVNSP PLLGQGASAY SQRGTLQSSF SPSLRPWSDI PMPSSEHHKS QPIQQPSIFG 300 SRFLSNALPG FCIPARIQAG FRGCNSYRFV NVENSIVHPI SSEQKRFHVD CGEPHFKKNL 360 NLFHNDAAKD RRHIKIDTVM NVVTI

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MGMKSTGGEI VQVQGGHIVR STGRKDRHSK VFTAKGPRDR RVRLSAHTAI QFYDVQDRLG  60
YDRPSKAVDW LIKKAKNAID KLAELPPWHP TPNTANADHN NNNAAGSSDM AIAEQSESSG  120
YNFQLQRQLG EDHDNHHSAF IPSPIDTDAI AFFPTTTATS SINFQTYPPD IISRTNNSTE  180
DLGLSLHSFQ DPGLIHAQSQ AGANQTPSND QTLFSGSTQG GFEANYPRIV SWNNDASTDM  240
NRTGFMVNSP PLLGQGASAY SQRGTLQSSF SPSLRPWSDI PMPSSEHHKS QPIQQPSIFG  300
SRFLSNALPG FCIPARIQAG FRGCNSYRFV NVENSIVHPI SSEQKRFHVD CGEPHFKKNL  360
NLFHNDAAKD RRHIKIDTVM NVVTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-70	TCP family protein