PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX59279.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 252aa MW: 28263.7 Da PI: 6.4968

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX59279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.2	3.2e-39	7	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+l+ RDX59279.1 7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAYLR 105 7***********************89*******************************************************************99 PP DUF260 99 ee 100 e+ RDX59279.1 106 EQ 107 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD 60 RCEAAVTISY EAQARLQDPI YGCVAHIFAL QQQVVNLQAQ LAYLREQAGQ IYLNASATEN 120 PNEKYFGKPT TSPQDLQSWF QMENSNMASQ VLPNFSTNPS TQYYGNTNTL IDPNPIGNYE 180 NSAGTIDESI SFSSFEESCN SMSYDMQRQN PIWNKVTLNS RKQAIPKLEA KEHICRESIL 240 LRLEWWEEKN GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	1e-61	LBD family protein