PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60173.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 317aa MW: 35310.1 Da PI: 7.9189

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.8	8.6e-40	139	215	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++ l +akeyhrrh+vC++hskap+++v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk++ RDX60173.1 139 RCQVEGCHVALMNAKEYHRRHRVCDMHSKAPKAVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSS 215 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDFGGNNMFG LNNHTKEENG NTSTNNNNNS TIVNVWYSSW EPTTAAESYG SGGQRRHQQL 60 YGGDGCHVQA DPHLTCLHLG KRHYFEDANN VGGPLGNRHV CGGGGFGLEG NDKRPRGYCG 120 GGTAAGGGGK TAAFAMVPRC QVEGCHVALM NAKEYHRRHR VCDMHSKAPK AVVLGLEQRF 180 CQQCSRFHVV SEFDDSKRSC RRRLAGHNER RRKSSHLSVT RNSRQGCALS LLSSTGSESW 240 LSHADLSTRC SAALSELIAE NRAALMTRQQ PQQHLVYDRD WHVLMPHHAL VEEDEQDFED 300 MQQPQSNYYP QHMFPQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	3e-35	SBP family protein