PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX60263.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 326aa    MW: 36745.2 Da    PI: 5.799
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX60263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox642.2e-2057112156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 ++  +++t+ q+ee+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  RDX60263.1  57 KKGYRRHTQRQIEEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 112
                 577889***********************************************999 PP
2START30.67.8e-11246322168
                 HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCC CS
       START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveelldd 68 
                 ela +a++el ++a+a++ +Wv  s   e++n+de+l++f+  +        ++ea+r+s+vv+m++ +l  +l+d+
  RDX60263.1 246 ELAVAAMEELTRLAQAGDSLWVPGShhsEILNEDEYLRTFPARGLgpkplgLRSEASRESVVVIMNHINLIDILMDV 322
                 57899*****************999999************77666******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MFQTNMFDSH THMLEMSSRS ESDLGKARDD EYDSKFGTDT IDPPSGDDQD PNPRPKKKGY  60
RRHTQRQIEE MEAFFKQCPH PDDKQRKELS RELGLEPLQV KFWFQNKRTQ MKTQQERNEN  120
AILKAENEKL RAENNRYKEA LTNATCPNCG GPAALGEMSF DEQHLRIENA RLREEIDRIS  180
GIAAKYVGKP VTSSYSNLSS LNNNHMHVGN YGAHSQCGVV GEMYGGSDLF RSLPAPGDAD  240
KPMIVELAVA AMEELTRLAQ AGDSLWVPGS HHSEILNEDE YLRTFPARGL GPKPLGLRSE  300
ASRESVVVIM NHINLIDILM DVVSVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.21e-155HD-ZIP family protein