PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60493.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 234aa MW: 26300.1 Da PI: 9.266

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.8e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W++ ++ g+ R++k+c++rw +yl RDX60493.1 13 KGPWTAEEDQILVSHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYL 60 79****************************99**********97 PP
2	Myb_DNA-binding	47.1	5.6e-15	66	142	1	48
TSSS-HHHHHHHHHHHHHTTTT..............................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............................tWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ ++++++ lG++ +W++Ia+ ++ gRt++++k++w+++l RDX60493.1 66 RGKFSKEEENTILKLHEILGNRlvpimftlgginnsnhnlnvinfivnplmlRWSAIAASLP-GRTDNEIKNFWHTHL 142 89**********************************************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MRTPCCERMG LKKGPWTAEE DQILVSHIQL YGHGNWRALP KQAGLLRCGK SCRLRWINYL 60 RPDIKRGKFS KEEENTILKL HEILGNRLVP IMFTLGGINN SNHNLNVINF IVNPLMLRWS 120 AIAASLPGRT DNEIKNFWHT HLKKKIDKSG VHNANVCSHI LHETQANSSD ASSVAGNVMI 180 ANYGLPSRKN PPTGFYAAVS SDTCGETMDN HGSSQLSEEM EFWYNIFIKS GQPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-65	MYB family protein