PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60505.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 343aa MW: 39048.7 Da PI: 5.8624

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.3	1.7e-27	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien +nrqvtfskRrng++KKA+ELS+LCd+++avi+fs++g++ +s RDX60505.1 9 KRIENPTNRQVTFSKRRNGLIKKAYELSILCDIDIAVIMFSPSGRVNHFS 58 79********************************************9997 PP
2	K-box	24.2	1.4e-09	123	190	11	78
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 +++ e+lqqe+++L++++++ ++++R + + L+ s+ eL++ e++L + l+++ ++K+ ll ++++ RDX60505.1 123 NSEIEELQQEVNRLQQQLQMAEEQIRLYEPDPLKMTSMAELESSEKHLVDVLTRVIQRKEYLLSNHLS 190 57899**********************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRVKLEIKR IENPTNRQVT FSKRRNGLIK KAYELSILCD IDIAVIMFSP SGRVNHFSGR 60 RRIEDVFTRY INLPDQERDN AVSFPELPYR RGIQNKEYLL RTLQQLRSEN DIALQLANPG 120 DINSEIEELQ QEVNRLQQQL QMAEEQIRLY EPDPLKMTSM AELESSEKHL VDVLTRVIQR 180 KEYLLSNHLS SYDPSGIQGI PTSFENVGWL QDGSQNHAQI FDASAPLDPL RDLSSTVYGS 240 FSQGTSSNAD PRGMGECHVS NPSDGNLQAW PQGYTLYPHI QHDMVGPDMP DMMPHGQVNL 300 PITASHVEPP KNEAAEFDQS KQPQPQPQPQ PQPHHHHHQL NAQ

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRVKLEIKR IENPTNRQVT FSKRRNGLIK KAYELSILCD IDIAVIMFSP SGRVNHFSGR  60
RRIEDVFTRY INLPDQERDN AVSFPELPYR RGIQNKEYLL RTLQQLRSEN DIALQLANPG  120
DINSEIEELQ QEVNRLQQQL QMAEEQIRLY EPDPLKMTSM AELESSEKHL VDVLTRVIQR  180
KEYLLSNHLS SYDPSGIQGI PTSFENVGWL QDGSQNHAQI FDASAPLDPL RDLSSTVYGS  240
FSQGTSSNAD PRGMGECHVS NPSDGNLQAW PQGYTLYPHI QHDMVGPDMP DMMPHGQVNL  300
PITASHVEPP KNEAAEFDQS KQPQPQPQPQ PQPHHHHHQL NAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22130.1	1e-104	MIKC_MADS family protein