PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60539.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 839aa MW: 90479.3 Da PI: 6.1128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.9	2.8e-16	560	606	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq RDX60539.1 560 VHNQSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 606 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
TVLSSALLLC KSFAAFCVHL GHSTASEILG ILFLRAETQS LRPQRLLFDN FPVENLVGHA 60 SRGAQEENTG FQPEIIRVTW VSLDLSRESV SLLSMELNWA LYRLAREKLG QETNSTRAPD 120 QCSSPENDFF ELVWENGQIS SQGQSSRVRR SPPCRSLPSH CLPSHSPKGR DKDVGYGANT 180 RMGKFGDLDP GLNEIPMSVP SSEVDFCQDE DVLPWSDYTT MDGSLQHEYG SDFLPASNSF 240 TLLDKKSNGN MAFRDSHKTC EEQGNVFKGS SAEQVETARP KASTSQLYPP SLHQCETSFV 300 CARSRTSDIT ENNNTSNANQ DAPYGEITHI LSSSTDFSSV KVAKQDPPMP SNGSSSTVMN 360 FSHFARPAAI VRANLQNISF KSGLSSARSD SMEIKNKGAA ATSSNPPESI LVDSSGESSK 420 EPIMHCQQQV EEQSKVDLNS LQPKSVEQNA VPPKQSEPAC KERGTKIDQT PNKVLGDSGA 480 KGQIAAEKCI EPVVASSSVC SGNDADRGSD EPIKILKRKR KNIEDSECHS EDVEEESVGV 540 KKAASGRGGP GSKRSRAAEV HNQSERRRRD RINEKMRALQ ELIPNCNKVD KASMLDEAIE 600 YLKTLQLQVQ IMSMGAGLYM PPMMLPAGMQ HMHAPHMAPF SPMGVGMHMG FGMGYGMGMP 660 DMNGGSSRFP MIQVPQMQGT HIPVANMSGP TALHGMARPN TPGFGLPGQG HPMPTPQVPV 720 FPFSGGPLMN SSAVGLHASV ETVDSASVSG LNDQMPNVEP QVKQSTAGRD STNQMPTQCE 780 AAAVGFEQSP LVHSSGHASE SNENGAVNPG PVMIDKTVAN GSSKNLSPIV TQDIIFQSS

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

TVLSSALLLC KSFAAFCVHL GHSTASEILG ILFLRAETQS LRPQRLLFDN FPVENLVGHA  60
SRGAQEENTG FQPEIIRVTW VSLDLSRESV SLLSMELNWA LYRLAREKLG QETNSTRAPD  120
QCSSPENDFF ELVWENGQIS SQGQSSRVRR SPPCRSLPSH CLPSHSPKGR DKDVGYGANT  180
RMGKFGDLDP GLNEIPMSVP SSEVDFCQDE DVLPWSDYTT MDGSLQHEYG SDFLPASNSF  240
TLLDKKSNGN MAFRDSHKTC EEQGNVFKGS SAEQVETARP KASTSQLYPP SLHQCETSFV  300
CARSRTSDIT ENNNTSNANQ DAPYGEITHI LSSSTDFSSV KVAKQDPPMP SNGSSSTVMN  360
FSHFARPAAI VRANLQNISF KSGLSSARSD SMEIKNKGAA ATSSNPPESI LVDSSGESSK  420
EPIMHCQQQV EEQSKVDLNS LQPKSVEQNA VPPKQSEPAC KERGTKIDQT PNKVLGDSGA  480
KGQIAAEKCI EPVVASSSVC SGNDADRGSD EPIKILKRKR KNIEDSECHS EDVEEESVGV  540
KKAASGRGGP GSKRSRAAEV HNQSERRRRD RINEKMRALQ ELIPNCNKVD KASMLDEAIE  600
YLKTLQLQVQ IMSMGAGLYM PPMMLPAGMQ HMHAPHMAPF SPMGVGMHMG FGMGYGMGMP  660
DMNGGSSRFP MIQVPQMQGT HIPVANMSGP TALHGMARPN TPGFGLPGQG HPMPTPQVPV  720
FPFSGGPLMN SSAVGLHASV ETVDSASVSG LNDQMPNVEP QVKQSTAGRD STNQMPTQCE  780
AAAVGFEQSP LVHSSGHASE SNENGAVNPG PVMIDKTVAN GSSKNLSPIV TQDIIFQSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	565	570	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	6e-47	bHLH family protein