PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX60640.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 199aa    MW: 22817.4 Da    PI: 9.8429
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX60640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81.1e-313079150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  RDX60640.1 30 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 79
                79***********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MADEYTMAFP NPSMSVSPQR KMGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC  60
DAEVALIVFS SRGRLYEYAN NRYLLSFVPF LLNFFSHFSS LLTSPFELLW RGKLIRNDHF  120
GFSLGTLAKD SERSDEPIRV TQYISPLLRQ CTTIEIANRR VLSIWLLPCN GKRKTIAAAA  180
IAEAEMDGCD VHRLSDRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.25e-39MIKC_MADS family protein