PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60847.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 342aa MW: 39468.9 Da PI: 8.59

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.2	3.3e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA ELS+LCdae+a+i+fs+ gkl++y+s RDX60847.1 9 KKIDNVTARQVTFSKRRSGLFKKARELSILCDAEIALIVFSPGGKLFDYAS 59 68***********************************************86 PP
2	K-box	36.5	2.1e-13	250	313	19	82
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 +++a L++e+ + +e+R+l Ge+L+ L+lkeLq+Le++L++sl+++ + K + l+e+ ++l++ RDX60847.1 250 RNYADLNRELGEKTHEIRQLNGEELQGLTLKELQKLEDRLDSSLNHVYKAKGNKLMEENRRLKQ 313 567777777777789********************************99998888888888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MVRKKIPIKK IDNVTARQVT FSKRRSGLFK KARELSILCD AEIALIVFSP GGKLFDYASS 60 SMESVTERHS SRSELNLDKL GQSCAKEQVS IQQVDNREIC DHCLMMLDLL KNEVCELICE 120 YHCHTKLPNG GLSLLIAMVP KMNNTILEFQ LASLIGSVDK TIYQHLIICL KKVDFKNTYD 180 SMNWVFLDYM LRRLDFCEKC RTWIRECVFY GAPSILVNRC PIQETPMFRG LKQGDPLSPF 240 LFSLLLRVRR NYADLNRELG EKTHEIRQLN GEELQGLTLK ELQKLEDRLD SSLNHVYKAK 300 GNKLMEENRR LKQIKPRNEI CLVQRHEHEQ GTSDTSLTLG SP

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MVRKKIPIKK IDNVTARQVT FSKRRSGLFK KARELSILCD AEIALIVFSP GGKLFDYASS  60
SMESVTERHS SRSELNLDKL GQSCAKEQVS IQQVDNREIC DHCLMMLDLL KNEVCELICE  120
YHCHTKLPNG GLSLLIAMVP KMNNTILEFQ LASLIGSVDK TIYQHLIICL KKVDFKNTYD  180
SMNWVFLDYM LRRLDFCEKC RTWIRECVFY GAPSILVNRC PIQETPMFRG LKQGDPLSPF  240
LFSLLLRVRR NYADLNRELG EKTHEIRQLN GEELQGLTLK ELQKLEDRLD SSLNHVYKAK  300
GNKLMEENRR LKQIKPRNEI CLVQRHEHEQ GTSDTSLTLG SP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	1e-31	MIKC_MADS family protein