PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61044.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 245aa MW: 26246 Da PI: 7.9124

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.4	9e-42	45	144	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe +r da++slvyeA+ r+rdPvyG++g i++lqqq+++l+ael+++++ RDX61044.1 45 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIRA 143 7**********************************************************************************************9988 PP DUF260 100 e 100 e RDX61044.1 144 E 144 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MFGLPETDRL DDITKVIAEG EPSSQMGRKH FYGPTPGTTL NTVTPCAACK LLRRRCAEEC 60 PFSPYFSPHE PQKFAAVHKV FGASNVSKML MEVPEGQRAD AANSLVYEAN LRLRDPVYGC 120 MGAISALQQQ VQSLQAELNA IRAEILKYKY REAASLISSH HAALVSSADH AVSVAIPADH 180 SQGLSQPPPL LLPKPLPSPS PKPLPSPSVI LSSLSSSSAS SVYTPPKSSM SLGSISSTEN 240 VPYFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	6e-67	LBD family protein