PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61163.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 230aa MW: 25370.3 Da PI: 8.3997

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	124.6	5.1e-39	43	143	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +kll ++p ++r da+ +l+yeA arardPvyG+vg++++lqqq+ +l+ael +++ RDX61163.1 43 PCGACKFLRRKCVKGCIFAPYFDSDQgTAHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVINLQAELTYVQ 141 7*********************9989******************************************************************998 PP DUF260 99 ee 100 ++ RDX61163.1 142 AR 143 76 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
KPLIYIYSNI SFLVPHKISW LNPELRVEMD CGGKIGGSER GGPCGACKFL RRKCVKGCIF 60 APYFDSDQGT AHFAAVHKVF GASNASKLLM RIPVHKRLDA VVTLCYEALA RARDPVYGCV 120 GHLFALQQQV INLQAELTYV QARLATMQRL PMSVASLAHP QSSSSPPTLL SSDQLPSNAD 180 LQSASMHLEL YQPHSTSLEL SNVFNPLDQQ FQDRELQALA REFVARCLPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00210.1	3e-67	LBD family protein