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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX61415.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 196aa MW: 22312.8 Da PI: 10.2848 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 59.7 | 6.9e-19 | 71 | 121 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp++ng +r++lg++ ++eAa a+++a+ k++g
RDX61415.1 71 HYRGVRRRP-WGKFAAEIRDPKKNG--TRIWLGTYENEKEAALAYDKAAFKIRG 121
8********.***********9998..**********99*************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 196 aa Download sequence |
MATTISCDFS SLESIQHYLL ELEHDSNTLM NVSNNEICYS EVVGDANDLL ACKREHPMVA 60 HDVHAPPVWK HYRGVRRRPW GKFAAEIRDP KKNGTRIWLG TYENEKEAAL AYDKAAFKIR 120 GSKAKLNFPH LIDSHVPLKP VKITKASKKN LLEPYLSFLP ASETQGSKKT KKLAHLLNKL 180 AKNRSQVQML KMRGKH |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G44840.1 | 4e-36 | ERF family protein | ||||




