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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX61419.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 192aa MW: 21085.3 Da PI: 6.9591 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 60.5 | 3.9e-19 | 131 | 180 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr+++ +g+++AeIrdp+ ng +r++lg++ +ae+Aa a+++a+ +++g
RDX61419.1 131 YKGVRRRP-WGKFAAEIRDPNRNG--ARVWLGTYESAEDAALAYDRAAFQMRG 180
9*******.**********96665..*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 192 aa Download sequence |
MVSWKPLQHV METLCSFNNA PKPISAPASK SEDASTKWHK NQPLSNSTTF QNDMNLNTTL 60 ESDFALLDSI QRYLLDDNDD FNALASVLAT PNGFGNESVN SSSEQATTAA TEARGASSSA 120 AREPHAPYQS YKGVRRRPWG KFAAEIRDPN RNGARVWLGT YESAEDAALA YDRAAFQMRG 180 SKAKLNFPHL IG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G44840.1 | 1e-29 | ERF family protein | ||||




