PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61674.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 446aa MW: 50051.4 Da PI: 6.9344

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	20	1.2e-06	403	425	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C++f + C+ G++C+F H+ RDX61674.1 403 KPCKYFNSSRGCRNGSNCRFQHD 425 69********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
CFLLAWCYCF SVFYLHGATA SVFYTLVRTF SSEDCPSKVG EKYQDHLQAK GLSIWPSTTN 60 EYDDDLPPGF ESNHFWNQSK AELPHIPQIK WECPPLFTLS DGWRVAVGEE SREIYDQQKR 120 EIRVLEAIYP RAYSIPPGPS ISSEVEKECY DDSLTPLVSF IPIEDQEGSV EYIEPHVKAA 180 VTKHEDSPTN LQQYITSETS LINSQCSEKK KPVAITYSEA EVAAASALVV ASMTSNEIDM 240 DLLAEIFNDP VMIEKLIEKH RTVITTVSTP TSNSKPSTSL VQLSSPALNT TVGLLHASES 300 SQETPSVSLL TSTLVKPATA VATSSAKPTK TRPVTRHPPS TGAVKDVDRK VIRKSDTHKE 360 DVQRQEARDV RRSGTHKEDT QRQGLKRPRD NITMEEVKFK IQKPCKYFNS SRGCRNGSNC 420 RFQHDVSGMS RIAKRLNVRS ENTWRM

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

CFLLAWCYCF SVFYLHGATA SVFYTLVRTF SSEDCPSKVG EKYQDHLQAK GLSIWPSTTN  60
EYDDDLPPGF ESNHFWNQSK AELPHIPQIK WECPPLFTLS DGWRVAVGEE SREIYDQQKR  120
EIRVLEAIYP RAYSIPPGPS ISSEVEKECY DDSLTPLVSF IPIEDQEGSV EYIEPHVKAA  180
VTKHEDSPTN LQQYITSETS LINSQCSEKK KPVAITYSEA EVAAASALVV ASMTSNEIDM  240
DLLAEIFNDP VMIEKLIEKH RTVITTVSTP TSNSKPSTSL VQLSSPALNT TVGLLHASES  300
SQETPSVSLL TSTLVKPATA VATSSAKPTK TRPVTRHPPS TGAVKDVDRK VIRKSDTHKE  360
DVQRQEARDV RRSGTHKEDT QRQGLKRPRD NITMEEVKFK IQKPCKYFNS SRGCRNGSNC  420
RFQHDVSGMS RIAKRLNVRS ENTWRM