PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61871.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 346aa MW: 38971.9 Da PI: 6.8559

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.8	5e-13	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WTteEd + + ++G+g+W++++++ ++R++k+c++rw +yl RDX61871.1 14 RGVWTTEEDTKKLAFGSKHGSGNWTSVPKKARLKRCGKSCRLRWTNYL 61 899*******************************************97 PP
2	Myb_DNA-binding	46.5	8.5e-15	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++Tt+E++l++++++ G++ W+ Ia+ ++ gRt++++k++w++ RDX61871.1 68 DNFTTQEEDLIIKLHAAIGSR-WSIIAQQLP-GRTDNDVKNYWNT 110 589****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MVRSPCCEKI NVKRGVWTTE EDTKKLAFGS KHGSGNWTSV PKKARLKRCG KSCRLRWTNY 60 LRPDLKDDNF TTQEEDLIIK LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLKKKLSQMG 120 IDPVTHKPFS KLIADYGNIG GCQKSSTRIG SINKDFKNAM MLKSEPHQTL PQGFNDQSKL 180 PPKMETNGNN FLFNRSHSDN LSMDLDQFQA IPMVSGASNC IDFENETIPA SVLGEVCLSK 240 TSSPSTHSTC STSAFSWNDF LLEDAFTPLA DNQEQDIMVS KDFVGQIENV TRQSWNNKEV 300 KSQQASTSDF QFSPSSDISF IEAMLDQENE MFLSFPHLME EPSNLS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MVRSPCCEKI NVKRGVWTTE EDTKKLAFGS KHGSGNWTSV PKKARLKRCG KSCRLRWTNY  60
LRPDLKDDNF TTQEEDLIIK LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLKKKLSQMG  120
IDPVTHKPFS KLIADYGNIG GCQKSSTRIG SINKDFKNAM MLKSEPHQTL PQGFNDQSKL  180
PPKMETNGNN FLFNRSHSDN LSMDLDQFQA IPMVSGASNC IDFENETIPA SVLGEVCLSK  240
TSSPSTHSTC STSAFSWNDF LLEDAFTPLA DNQEQDIMVS KDFVGQIENV TRQSWNNKEV  300
KSQQASTSDF QFSPSSDISF IEAMLDQENE MFLSFPHLME EPSNLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	3e-68	MYB family protein