PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX62215.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GATA
Protein Properties Length: 244aa    MW: 27240.1 Da    PI: 8.2172
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX62215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.62.3e-20125159135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  RDX62215.1 125 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 159
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MHRCCSGSQG HVMGPCTCGM FHSQTTSFSM LFSMPNHKPP YDESNIYDYS FPPSSSSSSS  60
SVDCTLSLGT PSTRFTEDEE KRTRHERRSV SNFCWDLLQS KHNPQSQTKS SRTTNTTDPL  120
LARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRFKKEERR ASAAAATPAV ASGGGMESAQ  180
VYSNSWYAHP QSQKSQKMQC FSPGMENEFR FVDDGDRDSD NGIPFLSWRL NVTDRTSLVH  240
DFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-54GATA family protein