PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62245.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 343aa MW: 38965.7 Da PI: 7.1019

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl RDX62245.1 14 KGPWSPEEDAKLKAYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.1	7.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ RDX62245.1 69 GGFSEEEDNIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYVSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQAQAR RVNNNLQKQE VKRETENFIV ASQVINQVPY WSPEFSSVSM PLTNIASFQH 180 YGLNNQTSLR NSMVNKLEGI RFSSDHHQQQ QTYTNACEIP SQTDQVFPTT MNMVNHVAVV 240 SNENNSSTYH PSNIFQGFEE FPNDFCELVC VNPQQMEGFN YGMESMDMSN GGSTNTTSTE 300 STSWGDMSSL VYSPLVSDYE GCRQGIPQDV AFEECKYFGM QMQ

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYVSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQAQAR RVNNNLQKQE VKRETENFIV ASQVINQVPY WSPEFSSVSM PLTNIASFQH  180
YGLNNQTSLR NSMVNKLEGI RFSSDHHQQQ QTYTNACEIP SQTDQVFPTT MNMVNHVAVV  240
SNENNSSTYH PSNIFQGFEE FPNDFCELVC VNPQQMEGFN YGMESMDMSN GGSTNTTSTE  300
STSWGDMSSL VYSPLVSDYE GCRQGIPQDV AFEECKYFGM QMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	4e-78	MYB family protein