PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62248.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 345aa MW: 39159.3 Da PI: 6.7574

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl RDX62248.1 14 RGLWSPEEDEKLMNYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	48.8	1.6e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ RDX62248.1 67 RGSFSPQEATLIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLMNYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEATLIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD 120 VIPSLATFSD IHSHSNGSME SFFPLTNNPI LKSHHHLDQL YLPLIPSPIL QGFDHHHNDI 180 KIDINNFNNA NFLHFHNPMQ EIMPPPNNIP SLYEDTWSSL GCVPFHLNPN QENQIMIPKS 240 DATPHFIVEK FITPSTWQHS VEPIIVPKVC ESIEDYVCSI PYSSFVSQEH EEATTVACYT 300 PSIYPQNQTA TTNQVEADYI DAIIMSSLSS STTSSTSVSF IQPDK

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLMNYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEATLIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD  120
VIPSLATFSD IHSHSNGSME SFFPLTNNPI LKSHHHLDQL YLPLIPSPIL QGFDHHHNDI  180
KIDINNFNNA NFLHFHNPMQ EIMPPPNNIP SLYEDTWSSL GCVPFHLNPN QENQIMIPKS  240
DATPHFIVEK FITPSTWQHS VEPIIVPKVC ESIEDYVCSI PYSSFVSQEH EEATTVACYT  300
PSIYPQNQTA TTNQVEADYI DAIIMSSLSS STTSSTSVSF IQPDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	1e-80	MYB family protein