PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX62424.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family AP2
Protein Properties Length: 478aa    MW: 54218.4 Da    PI: 9.4957
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX62424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-19120166251
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 gy+GVr+++ +g+++AeIrdp+ ng   r+++g+f+taeeAa a+++a+ 
  RDX62424.1 120 GYRGVRRRP-WGKFAAEIRDPTRNG--VRVWIGTFDTAEEAALAYDQAAF 166
                 8********.**********98887..*********************95 PP
2AP256.38.1e-18328378255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y G+r+++ +g+++AeIrd    + k +r++lg+f++aeeAa a+++a+ +++g
  RDX62424.1 328 SYIGIRRRP-WGKFAAEIRDtT--R-KGRRVWLGTFDSAEEAALAYDQAAFSMRG 378
                 599******.**********33..2.24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
LTILRKEAAR FANLSNLGIE LNNLLEAFEI VLFDSRYFLT YKHLTKTRMD FNSSQFWYQS  60
LESSDLNSWE ELFSFNKLPL NNVRKESTWD SKTSSENMCE GSNPKAVSTK ASTCKREKRG  120
YRGVRRRPWG KFAAEIRDPT RNGVRVWIGT FDTAEEAALA YDQAAFLTKG VLATLNFSVQ  180
VVMDSLQQMG FKTLRNHRSP LLELKRMHLF TTKSKATKKR PSNNPNLDTA HNVLVLEDLG  240
PEYLDQLLTF TCPASSTIIY LAYLFKATIN MTSPFSQHSD WGTLKEPSNI LFESFSSRGI  300
DYDPIHDSLA YNMNPQEASH QVIKTNKSYI GIRRRPWGKF AAEIRDTTRK GRRVWLGTFD  360
SAEEAALAYD QAAFSMRGLS AVLNFPVKRV KESLQEMNYS GCSQGCSPAL ELKERHNIRR  420
KLSSKAKKSN GKQELEGSSV VVLEDLGAEY LEALLSISDP SASSAALNNQ KFYDIFEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-41ERF family protein