PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62463.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 413aa MW: 45419.5 Da PI: 7.9661

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.4	8.1e-16	205	251	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L++l+P+a K +Ka++L ++++Y+k+Lq RDX62463.1 205 VHNQSERKRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVINYLKQLQ 251 5***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MELQLKVSFL ERPIGVEGES NYDEVAELIW ENGHLSMHGL GGLQPTTTQE KPILSRAHDT 60 LESMVQHATY QHYQPSKFTR EVNAPSRINS VAAPYGEIQA VPSSTRKRTW SNSDYSGRNL 120 GTNTNVLEEC DILSGCASAG ATFCRDNDTT MMTWASLESG RSLKTMEEDS ACHCGSEIRD 180 NQDDRDSKAE IGQGNSKRRS RTAAVHNQSE RKRRDRINQK MKALQKLVPN ASKTDKASML 240 DEVINYLKQL QAQIQMMNMT SMPQMMVPLA MQQQLQMSML ARMGAAGLGM GMGMVNINNM 300 AAQTSGPRSF PQLIQPTTTV GAPPATAPVF VAPSFMMPSM IQAHVPAPPK LQPASSGSIA 360 SIPLPHPYAT GLTQPINMDI LNNMASLYRQ QMSQNNHQAL SSSMSQLHHE QGR

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MELQLKVSFL ERPIGVEGES NYDEVAELIW ENGHLSMHGL GGLQPTTTQE KPILSRAHDT  60
LESMVQHATY QHYQPSKFTR EVNAPSRINS VAAPYGEIQA VPSSTRKRTW SNSDYSGRNL  120
GTNTNVLEEC DILSGCASAG ATFCRDNDTT MMTWASLESG RSLKTMEEDS ACHCGSEIRD  180
NQDDRDSKAE IGQGNSKRRS RTAAVHNQSE RKRRDRINQK MKALQKLVPN ASKTDKASML  240
DEVINYLKQL QAQIQMMNMT SMPQMMVPLA MQQQLQMSML ARMGAAGLGM GMGMVNINNM  300
AAQTSGPRSF PQLIQPTTTV GAPPATAPVF VAPSFMMPSM IQAHVPAPPK LQPASSGSIA  360
SIPLPHPYAT GLTQPINMDI LNNMASLYRQ QMSQNNHQAL SSSMSQLHHE QGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	214	KRRSRTAAVHNQSERKRR
2	210	215	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61270.1	3e-38	bHLH family protein