PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62616.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 345aa MW: 37672.1 Da PI: 6.6543

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	27.6	6.1e-09	4	47	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 + C+ +++ ++l+C+ + +lC C ++ H H +v+ RDX62616.1 4 KLCDSCKSATATLYCRPDAAFLCGACDSKVHAAnklasrHPRVS 47 58*****************************6567777787776 PP
2	zf-B_box	22.4	2.5e-07	47	90	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ +++ C+ + lC C +H+ H++ p RDX62616.1 47 SLCEVCEQAPAHVTCKADAAALCLACDRDIHSAnplasrHERLP 90 68*****************************6688888898876 PP
3	CCT	70.4	4.6e-24	252	295	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ RDX62616.1 252 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 295 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MASKLCDSCK SATATLYCRP DAAFLCGACD SKVHAANKLA SRHPRVSLCE VCEQAPAHVT 60 CKADAAALCL ACDRDIHSAN PLASRHERLP VTPFFESVHS VKASSPINFL DDHRFFSDAD 120 ADVSTEEAEA ASWLLPTPKT DLNSSQYLFS ESEPVPYIDL DYAAVDPKAE QKSSATADGV 180 VPVQSNFEPF AYGYKYNCTL SQSQSQMSHS VSSSSMEVGV VPDGNTMSEI SNCSYSKVAA 240 VTVTAQFSAA DREARVLRYR EKRKNRKFEK TIRYASRKAY AETRPRIKGR FAKRTDIDPL 300 AGYGVVPSFC LAEGGEGNID GNSTSFSAMA AMHTFANQNL ECYWH

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MASKLCDSCK SATATLYCRP DAAFLCGACD SKVHAANKLA SRHPRVSLCE VCEQAPAHVT  60
CKADAAALCL ACDRDIHSAN PLASRHERLP VTPFFESVHS VKASSPINFL DDHRFFSDAD  120
ADVSTEEAEA ASWLLPTPKT DLNSSQYLFS ESEPVPYIDL DYAAVDPKAE QKSSATADGV  180
VPVQSNFEPF AYGYKYNCTL SQSQSQMSHS VSSSSMEVGV VPDGNTMSEI SNCSYSKVAA  240
VTVTAQFSAA DREARVLRYR EKRKNRKFEK TIRYASRKAY AETRPRIKGR FAKRTDIDPL  300
AGYGVVPSFC LAEGGEGNID GNSTSFSAMA AMHTFANQNL ECYWH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	1e-102	CO-like family protein