PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62624.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 342aa MW: 38420.1 Da PI: 5.043

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd+ll d++++ G g+Wk+ ++ g+ R++k+c++rw +yl RDX62624.1 14 KGRWTAEEDKLLTDYIQENGEGSWKSLPKNAGLMRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	44.9	2.7e-14	67	117	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e +v++++ l ++ +W+ Ia +++ gRt++++k++w+++l RDX62624.1 67 RGNITPEEEEMIVKLHAVLVKKhfgcRWSVIAGHLP-GRTDNEIKNYWNSHL 117 7999**********9999999999******.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRAPCCDKV GLKKGRWTAE EDKLLTDYIQ ENGEGSWKSL PKNAGLMRCG KSCRLRWINY 60 LRADVKRGNI TPEEEEMIVK LHAVLVKKHF GCRWSVIAGH LPGRTDNEIK NYWNSHLRRK 120 IYCFMRSLNE SLPPIDMATV NSVASKRRGR GPRNKPATEE EKNTALSQNS FESMPCCNTE 180 EAEEISMIDA CYEMEGNSST VASYPSLEGL GPYQRWNDDE IMRLSQMFEN GVLVNPSGNV 240 ALKDEPSGNE CDQIMHVDVM GTGQKIKNGV WNWNSANGDS GEWYPNCSSL NSAIDYQWSD 300 WDMAGSVQSD NQWDLCDDHQ IINCLWGTGI GEINASSDKA GV

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRAPCCDKV GLKKGRWTAE EDKLLTDYIQ ENGEGSWKSL PKNAGLMRCG KSCRLRWINY  60
LRADVKRGNI TPEEEEMIVK LHAVLVKKHF GCRWSVIAGH LPGRTDNEIK NYWNSHLRRK  120
IYCFMRSLNE SLPPIDMATV NSVASKRRGR GPRNKPATEE EKNTALSQNS FESMPCCNTE  180
EAEEISMIDA CYEMEGNSST VASYPSLEGL GPYQRWNDDE IMRLSQMFEN GVLVNPSGNV  240
ALKDEPSGNE CDQIMHVDVM GTGQKIKNGV WNWNSANGDS GEWYPNCSSL NSAIDYQWSD  300
WDMAGSVQSD NQWDLCDDHQ IINCLWGTGI GEINASSDKA GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	3e-74	MYB family protein