PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62760.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 462aa MW: 49495.9 Da PI: 6.0195

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.7e-10	305	353	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq RDX62760.1 305 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 353 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
YPIGEIGLAF DAPVRDTPVK GTLLNSVSFG TIELVQMGGQ ENAMGFQHGN ESILTCPSSG 60 LSGANVNVSE MAISSVSMAK PSDVANPFLA SSAWDPLVSL SQAQTFGGSS MVTHSDFANA 120 NSSYPLVLEN QGMSNTSHLV QYMSDSNLGG MVPKVHSYAS GGFSEMVGAA SFGQHGSGDM 180 GYPPHYNPIK EPPINGEQSQ VEDSILEEEA PGSAPSGNRR KRGLDHNSTF SPNKNGEGDA 240 VKDSPGKSSD GPKEHEKKPK VEQNNSADLR GKQSVKQTKD NNSQSGEAPK DNFIHVRARR 300 GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS 360 MKLATVNPEL NFDLDRILSK DILQSRIGHG IGAYGPGINS SHTFPNGSFH GTLAGMPSTS 420 SQFPPLPQSV LDHEFQSFYG IGYDSNTALD NLGSNGRLKT EL

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

YPIGEIGLAF DAPVRDTPVK GTLLNSVSFG TIELVQMGGQ ENAMGFQHGN ESILTCPSSG  60
LSGANVNVSE MAISSVSMAK PSDVANPFLA SSAWDPLVSL SQAQTFGGSS MVTHSDFANA  120
NSSYPLVLEN QGMSNTSHLV QYMSDSNLGG MVPKVHSYAS GGFSEMVGAA SFGQHGSGDM  180
GYPPHYNPIK EPPINGEQSQ VEDSILEEEA PGSAPSGNRR KRGLDHNSTF SPNKNGEGDA  240
VKDSPGKSSD GPKEHEKKPK VEQNNSADLR GKQSVKQTKD NNSQSGEAPK DNFIHVRARR  300
GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS  360
MKLATVNPEL NFDLDRILSK DILQSRIGHG IGAYGPGINS SHTFPNGSFH GTLAGMPSTS  420
SQFPPLPQSV LDHEFQSFYG IGYDSNTALD NLGSNGRLKT EL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	260	RRKRGLDHNSTFSPNKNGEGDAVKDSPGKSSDGPKEHEKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-81	bHLH family protein