PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63018.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 327aa MW: 37032.6 Da PI: 5.8477

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	8.9e-17	60	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+++++ +G +W++ ++ g+ R++k+c++rw +yl RDX63018.1 60 RGPWTPEEDLILINYINTYGHANWRALPKQAGLLRCGKSCRLRWINYL 107 89****************************99**********97 PP
2	Myb_DNA-binding	50.3	5.4e-16	113	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ ++ ++++lG++ W++Ia++++ gRt++++k+ w+++l RDX63018.1 113 RGNFTREEEDAIISLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 158 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MMGAPRFPIR ANILKHLLLV EWLQFKLSTS KTPDSFGFEA EGVVTKMGRA PCCEKMGLKR 60 GPWTPEEDLI LINYINTYGH ANWRALPKQA GLLRCGKSCR LRWINYLRPD IKRGNFTREE 120 EDAIISLHEM LGNRWSAIAA KLPGRTDNEI KNVWHTHLKK RLPENYQQSH HNPKRSKKQA 180 KLDVDSSKPN RDAKLEQDPV NFPIHASNTE DMPQCSSDTS SLTTSDNNSS INNLDMSLNV 240 NNTDTPENNL ALDEDFWSEV LSSDNSGETS GFPDIGVTYD RFQPMSSPLV TEEGVLIDAS 300 SSSMCDGMDF WSHVYARAEE FTQLLEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	3e-79	MYB family protein