PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63118.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 202aa MW: 24133 Da PI: 9.8751

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.2	6.1e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey+s RDX63118.1 9 KRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYIS 59 79***********************************************86 PP
2	K-box	78.8	1.3e-26	104	186	15	97
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++q +l+kLk+ ++nL++e+R+++G++L++L++++L+ Le++++k+ k +R++K++++++qi++++kk ++ +e +++L + RDX63118.1 104 QNMQDNLKKLKEVNRNLRKEIRQRMGDCLNDLNMEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLRD 186 89***************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KANELTVLCD AKVSIIMFSS TGKLHEYISP 60 STSTKQFFDQ YQMTLGVDLW NSHYEIYCFL PWKLEYIISS FLRQNMQDNL KKLKEVNRNL 120 RKEIRQRMGD CLNDLNMEDL KLLEEEMDKA AKVVRERKYK VITNQIDTQR KKFNNEKEVH 180 NRLLRDLVCI LAYVFVDFNI CN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	5e-59	MIKC_MADS family protein