PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63138.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 545aa MW: 60109.6 Da PI: 8.9392

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	490	512	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C+k F++ L H r+H RDX63138.1 490 HECPICNKIFRSGQALGGHKRSH 512 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MDGGSEGTGE LKAITVGDSD LSLSLLMMSY QPTEERKFVC KYCSKRFPCG KSLGGHIRTH 60 MMSEHSHSHS HSHSVQGNEE RSNASNAMFK FDGGRKRKRD LGSEGGGDGS GGNSNIIYGL 120 RENPKKTTRF VHSNATLQLD KFCKECGKGF PSLKALCGHM ACHSEKDKGA SNINSNRFES 180 SSAFVTEKQK LVMDSQSDTE TSAPRRSKRM RFKTLSNSNN NQPQSSSVSE VEQEQEEVAR 240 CLMMLSKDSS HRGRFALVTE SSDNNSVVLE AKSPSLETKV TTMMNSNGKN SMSSAYVEKK 300 LELQNKDIKF KSAEVGYDSD NSDSGYFRYG PKSDDSNDGF FRSEVKSSKV GYLSGFEEYD 360 VESRKVLSRG RSRSSEFKKF VREDWENERE GVAARKFDLK KFKKSNYDSL GQNLGGASSR 420 KVGNGFANDG INKYECLTSE RDNGSDDSAY ESDENSTDTD SYPAPKAHSN RNLSGQKGKK 480 KLKTKKSKAH ECPICNKIFR SGQALGGHKR SHFVGGSEEN TLVIRPGAPA VPCLIDLNLP 540 APVDE

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MDGGSEGTGE LKAITVGDSD LSLSLLMMSY QPTEERKFVC KYCSKRFPCG KSLGGHIRTH  60
MMSEHSHSHS HSHSVQGNEE RSNASNAMFK FDGGRKRKRD LGSEGGGDGS GGNSNIIYGL  120
RENPKKTTRF VHSNATLQLD KFCKECGKGF PSLKALCGHM ACHSEKDKGA SNINSNRFES  180
SSAFVTEKQK LVMDSQSDTE TSAPRRSKRM RFKTLSNSNN NQPQSSSVSE VEQEQEEVAR  240
CLMMLSKDSS HRGRFALVTE SSDNNSVVLE AKSPSLETKV TTMMNSNGKN SMSSAYVEKK  300
LELQNKDIKF KSAEVGYDSD NSDSGYFRYG PKSDDSNDGF FRSEVKSSKV GYLSGFEEYD  360
VESRKVLSRG RSRSSEFKKF VREDWENERE GVAARKFDLK KFKKSNYDSL GQNLGGASSR  420
KVGNGFANDG INKYECLTSE RDNGSDDSAY ESDENSTDTD SYPAPKAHSN RNLSGQKGKK  480
KLKTKKSKAH ECPICNKIFR SGQALGGHKR SHFVGGSEEN TLVIRPGAPA VPCLIDLNLP  540
APVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	4e-73	C2H2 family protein