PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63442.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 380aa MW: 41553.6 Da PI: 7.2362

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.9	1.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed++l+ +vk++G+g+W+t +++ g+ R++k+c++rw++yl RDX63442.1 14 KGAWTVQEDQKLIAYVKKHGTGSWRTLPQKAGLQRCGKSCRLRWFNYL 61 79********************************************97 PP
2	Myb_DNA-binding	48.4	2.2e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++ +++++ lG++ W++Ia++++ Rt++++k++w++yl RDX63442.1 67 RGKLSLEEEQTVINLHAVLGNR-WSSIAKHLP-MRTDNEIKNYWNSYL 112 78999***************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MGRTPCCSHE DLRKGAWTVQ EDQKLIAYVK KHGTGSWRTL PQKAGLQRCG KSCRLRWFNY 60 LRPDIKRGKL SLEEEQTVIN LHAVLGNRWS SIAKHLPMRT DNEIKNYWNS YLKKHYEKNV 120 VDPSSPKPIS TDSSTESKSK DSASQDGATT TTTHESHEQS LSKSSSSSLL NKVASKILAS 180 GYLEAIKSGQ PVVGAGNRNS ESVIKKGIGL ENNIMTEALM PNLGTLSRNQ LTSAQLLNKM 240 ATSLPHKVHG LEAAKAMFSK LMESGEKGET TSDGSFIGSD QVGGCLNALS PFEDGPHITR 300 IIDSPSSPTL IFNQVTIDNE DTWQCVSSNN VSFTNCTASG DCSVSEFILG ESPSSTSCFL 360 FENADLGTCD DEISKYIQYL

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MGRTPCCSHE DLRKGAWTVQ EDQKLIAYVK KHGTGSWRTL PQKAGLQRCG KSCRLRWFNY  60
LRPDIKRGKL SLEEEQTVIN LHAVLGNRWS SIAKHLPMRT DNEIKNYWNS YLKKHYEKNV  120
VDPSSPKPIS TDSSTESKSK DSASQDGATT TTTHESHEQS LSKSSSSSLL NKVASKILAS  180
GYLEAIKSGQ PVVGAGNRNS ESVIKKGIGL ENNIMTEALM PNLGTLSRNQ LTSAQLLNKM  240
ATSLPHKVHG LEAAKAMFSK LMESGEKGET TSDGSFIGSD QVGGCLNALS PFEDGPHITR  300
IIDSPSSPTL IFNQVTIDNE DTWQCVSSNN VSFTNCTASG DCSVSEFILG ESPSSTSCFL  360
FENADLGTCD DEISKYIQYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.2	2e-65	MYB family protein