PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63516.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 462aa MW: 49673.4 Da PI: 8.2776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49	1.1e-15	301	346	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K++Ka++L +++eY+k+Lq RDX63516.1 301 HNQSERKRRDKINQRMKTLQKLVPNS-----SKNDKASMLDEVIEYLKQLQ 346 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
LPSPFSLLPC EQAPNTVPST TLFNSSPKMS QCVPSWDVDD NPPPPRVSLR SNSNSTAPDV 60 PMLDYEVAEL TWENGQLSMH GLGLPRVPVK PPTTATNKYT WEKPRTNGTL ESIVNQATSL 120 PLRGKPTLNG HGVYGNFMVP WFDSHGGASA AANTVAMDAL VPCSNREQSK QGMESVPSTC 180 MMGCSTRVGS CCGNQAAKGA GHELSGRDQS VSGSATFGRD SKHVTLDTCD REFGVGLAST 240 SINSLDNTSS AKHCTKTTTV DDHDSVSHSK PVGEEGGDEK KKRANGKSSV STKRSRAAAI 300 HNQSERKRRD KINQRMKTLQ KLVPNSSKND KASMLDEVIE YLKQLQAQVQ MMNRINISSI 360 MLPLTMQQQL QMSMMSPMSM GLGMGMGMGM GMDMNSMNRV NLPGIPPVLH PSAFMPMAAS 420 WDAAAGGDRL QGTPATVMPD PLNLSTLFGC QSQLIPHHPS ML

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

LPSPFSLLPC EQAPNTVPST TLFNSSPKMS QCVPSWDVDD NPPPPRVSLR SNSNSTAPDV  60
PMLDYEVAEL TWENGQLSMH GLGLPRVPVK PPTTATNKYT WEKPRTNGTL ESIVNQATSL  120
PLRGKPTLNG HGVYGNFMVP WFDSHGGASA AANTVAMDAL VPCSNREQSK QGMESVPSTC  180
MMGCSTRVGS CCGNQAAKGA GHELSGRDQS VSGSATFGRD SKHVTLDTCD REFGVGLAST  240
SINSLDNTSS AKHCTKTTTV DDHDSVSHSK PVGEEGGDEK KKRANGKSSV STKRSRAAAI  300
HNQSERKRRD KINQRMKTLQ KLVPNSSKND KASMLDEVIE YLKQLQAQVQ MMNRINISSI  360
MLPLTMQQQL QMSMMSPMSM GLGMGMGMGM GMDMNSMNRV NLPGIPPVLH PSAFMPMAAS  420
WDAAAGGDRL QGTPATVMPD PLNLSTLFGC QSQLIPHHPS ML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	305	310	ERKRRD
2	306	311	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	5e-98	bHLH family protein