PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63786.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

NF-YA

Protein Properties

Length: 363aa MW: 39944.7 Da PI: 9.0466

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	87.5	1.9e-27	180	261	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekk........................ldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rakle++++ ++++ +pylheSRh hAl+R+RgsgGrF RDX63786.1 180 EEPIYVNAKQYHAILRRRQYRAKLEAQNRlikerkvsaflfphlsyvkflfnnTTNTVLQPYLHESRHIHALKRARGSGGRF 261 69************************************************9779999********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MKNFCEKGFG STHLTSPCTL GCSSQGTSLE SDVQQSFMSK SLQCHKTKRL CFQSQDQDSS 60 SSQSTCQSYP GVGSAQSGKV SHNVYIKRLK ICSNSSACST LNTTGGMEAF IRSSAGGQDF 120 TFPPSQMCHN QSVAHTAFHL ADPCFSGLVA APYGPPPNIH HAQLIGMPPA RIPLPLDLSE 180 EPIYVNAKQY HAILRRRQYR AKLEAQNRLI KERKVSAFLF PHLSYVKFLF NNTTNTVLQP 240 YLHESRHIHA LKRARGSGGR FLNTKKPEES KLTSANHPSC TNLNLSGNMS EYEVHPAENL 300 NYRDGASTTT CSVITSASNS DDVFHQHESD FRLCGFPSHG GRNMQGYSAH ISGSGNQHRL 360 SRN

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MKNFCEKGFG STHLTSPCTL GCSSQGTSLE SDVQQSFMSK SLQCHKTKRL CFQSQDQDSS  60
SSQSTCQSYP GVGSAQSGKV SHNVYIKRLK ICSNSSACST LNTTGGMEAF IRSSAGGQDF  120
TFPPSQMCHN QSVAHTAFHL ADPCFSGLVA APYGPPPNIH HAQLIGMPPA RIPLPLDLSE  180
EPIYVNAKQY HAILRRRQYR AKLEAQNRLI KERKVSAFLF PHLSYVKFLF NNTTNTVLQP  240
YLHESRHIHA LKRARGSGGR FLNTKKPEES KLTSANHPSC TNLNLSGNMS EYEVHPAENL  300
NYRDGASTTT CSVITSASNS DDVFHQHESD FRLCGFPSHG GRNMQGYSAH ISGSGNQHRL  360
SRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72830.2	5e-54	NF-YA family protein