PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX64188.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 233aa MW: 25656.3 Da PI: 8.4277

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX64188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	98.3	7.5e-31	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C+++C+l+p++ +++q +++ +v+k+FG++ ++++++++pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e+ RDX64188.1 2 SCNGCRVLRKGCSESCMLRPCLqwietAEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVET 100 6*******************9999777889**************************************************************998 PP DUF260 95 all 97 +l+ RDX64188.1 101 VLR 103 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MSCNGCRVLR KGCSESCMLR PCLQWIETAE AQGHATVFVA KFFGRAGLMS FISNVPENQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVET VLRGGTLRPM PEFMGLDAPA 120 AVADEASEAE VTCTDIWRIR DPNPNCRFTS SRSHKKLYTS AKRKRSEEFP KSQAPPNLDL 180 RLTPIFRPKV ESRRSGSPSM TSEESGTTTA CLESGFADQW GHGGDRKVLN LFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37540.1	2e-82	LBD family protein