PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65559.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 1033aa MW: 115871 Da PI: 4.4843

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	23.6	9.1e-08	522	541	5	25
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 C+ffa+ G+C +G++C+F H RDX65559.1 522 VCDFFAK-GWCIRGSSCSFLH 541 6****.*********** PP

Sequence ? help Back to Top
Protein Sequence Length: 1033 aa Download sequence
MSTPDSPVDP DIDSDPSLEE EEEEVEEEIE EEEVEEEEVE EEEEEVEEEV EEEEDEEEVE 60 EEEEEEEVEE EVEEEEEEEE EEEDGEQEVE EMEEEEGEEE DEEEEEEEEE EEDQQPQKEN 120 QQQQVGEAVE EKKEEQQPQE AAMEEKEDKT AVPGSSPDAD NQEHRKEWRV GVTRNTAEGG 180 GCWSLWIVTI ESGVWVGHNS DKIAGNWLEK RWVFINRWES SRTESGCWKR ATWQCVKASG 240 AGNWWRDANK GSVGEATACV TCTNKHKGNR KQLQTAVIAA MNHAAPPATA RHYDSLPGSR 300 TKTRCNVVIA SGIWCCDRAQ IGDSSQHMES KGQEKNLGPV SSVAENPEVM PPSSMHCMGE 360 NDAMLKKSVS CQTLTLKKEE VHLKYEISSH PKSRENLTSV EDCRSQGLDV DVENAGSLLQ 420 KETFGGYSEP GCNSNANLCG DNDLDPRARV TKSSSDTGQD MDIGLLPRDC LVEDANGGQN 480 SRNKTMQSEM ESRDDVKQVT LRTRSLSPSA EIKDRNKRPR IVCDFFAKGW CIRGSSCSFL 540 HIKDTVDYTD QEAEADLVTA HQKRELKVEE GVRENVERSR MNEQEASPSW HPSQEKQKFP 600 MRDNLFPENR FAFNASNNYF SPNLSLNSTR ADGVATLRNQ HMYRGYTSTV LSHSPNSSLV 660 TQFPATSMSL SHRIPAQSGR SLPFSSSLGA SNVDSQKLLH TDKEYATSKS TFSGSGREDL 720 ALVSSSRIPS YPTGYKSKLR SYNWEPSVPF RPSFFITSMN VSSPGDLYDP LRDSIEIPNL 780 GDGSLKAYLL IHGSNVQASS QVQTYDDSAV VGKHLSNLND EKSSVSSHNK FCENEPNKSS 840 VPHEKDGLAP ETEITSGTYV NYQNGKMGMG QHTFGVADST KRERNLTEHD ARHHGEGSGH 900 KKKRVDRDKK SHEMDVDFLT DGSMQKESKA LKFFRAALVE HVKELLKAAW QEGRLSKDAH 960 NMIVKKSVDK VVSTLEPHQI STIDTAKQYV SSSRVKIAKL VNCFKSRITA CISRCKFLPP 1020 PPPPPPPPPL ELH

Sequence ? help Back to Top

Protein Sequence Length: 1033 aa Download sequence

MSTPDSPVDP DIDSDPSLEE EEEEVEEEIE EEEVEEEEVE EEEEEVEEEV EEEEDEEEVE  60
EEEEEEEVEE EVEEEEEEEE EEEDGEQEVE EMEEEEGEEE DEEEEEEEEE EEDQQPQKEN  120
QQQQVGEAVE EKKEEQQPQE AAMEEKEDKT AVPGSSPDAD NQEHRKEWRV GVTRNTAEGG  180
GCWSLWIVTI ESGVWVGHNS DKIAGNWLEK RWVFINRWES SRTESGCWKR ATWQCVKASG  240
AGNWWRDANK GSVGEATACV TCTNKHKGNR KQLQTAVIAA MNHAAPPATA RHYDSLPGSR  300
TKTRCNVVIA SGIWCCDRAQ IGDSSQHMES KGQEKNLGPV SSVAENPEVM PPSSMHCMGE  360
NDAMLKKSVS CQTLTLKKEE VHLKYEISSH PKSRENLTSV EDCRSQGLDV DVENAGSLLQ  420
KETFGGYSEP GCNSNANLCG DNDLDPRARV TKSSSDTGQD MDIGLLPRDC LVEDANGGQN  480
SRNKTMQSEM ESRDDVKQVT LRTRSLSPSA EIKDRNKRPR IVCDFFAKGW CIRGSSCSFL  540
HIKDTVDYTD QEAEADLVTA HQKRELKVEE GVRENVERSR MNEQEASPSW HPSQEKQKFP  600
MRDNLFPENR FAFNASNNYF SPNLSLNSTR ADGVATLRNQ HMYRGYTSTV LSHSPNSSLV  660
TQFPATSMSL SHRIPAQSGR SLPFSSSLGA SNVDSQKLLH TDKEYATSKS TFSGSGREDL  720
ALVSSSRIPS YPTGYKSKLR SYNWEPSVPF RPSFFITSMN VSSPGDLYDP LRDSIEIPNL  780
GDGSLKAYLL IHGSNVQASS QVQTYDDSAV VGKHLSNLND EKSSVSSHNK FCENEPNKSS  840
VPHEKDGLAP ETEITSGTYV NYQNGKMGMG QHTFGVADST KRERNLTEHD ARHHGEGSGH  900
KKKRVDRDKK SHEMDVDFLT DGSMQKESKA LKFFRAALVE HVKELLKAAW QEGRLSKDAH  960
NMIVKKSVDK VVSTLEPHQI STIDTAKQYV SSSRVKIAKL VNCFKSRITA CISRCKFLPP  1020
PPPPPPPPPL ELH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33835.1	9e-44	C3H family protein