PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65604.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 149aa MW: 16592.7 Da PI: 8.5878

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.4	2.8e-44	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC +dC++apyfp e+p+kfanvhk+FGasnv+kll+++++ +reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el+++++ RDX65604.1 10 PCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPYQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVLRLQKELDATNA 108 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MASSSYSNSP CAACKFLRRK CMPDCIFAPY FPPEEPQKFA NVHKIFGASN VSKLLNEVQP 60 YQREDAVNSL AYEAEARIKD PVYGCVGAIS VLQRQVLRLQ KELDATNADL IRSSCNETTH 120 QGRGRRISDG ASSLSHSNGF YNPSTNWKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	8e-71	LBD family protein