PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65678.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 211aa MW: 23873.6 Da PI: 7.8941

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.5	5.7e-44	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+ +C++apyfp +qp+kfanvh++FGasnv+kll++l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+ +l +k+ RDX65678.1 7 PCAACKFLRRKCQLECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKS 105 7********************************************************************************************998887 PP DUF260 100 e 100 e RDX65678.1 106 E 106 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MASPNSPCAA CKFLRRKCQL ECAFAPYFPP DQPQKFANVH RIFGASNVTK LLNDLHPHQR 60 EDAVNSLAYE AEMRLRDPVY GCVGVISLLQ HQLRQLQMDL YCAKSELSRY QNLSITTTNH 120 GFIASECATT TYHHYQNTSS GSLSRDHHYH YHHHHQFFPR EQQMVRGFDS GNNYDASLLA 180 MNISASLGQL NQLQHQSAAG GGDDRHATNR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	3e-75	LBD family protein